YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187022421, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAEPHDFRD HKAHMKWTQE KEAYRANIPM IPQDMSSGSR GQTQATTVLQ KALNNPLVPL  60
   61 GMLATTGCLI GMMVATLRRS SRDAQLFMRG RVVAQGLTVA ALVGGAVMFG IGAPTEAALR 120
  121 APGKGQANVV SLTPPPAVQN NH

Type	Start	End	Confidence
Non-Cytoplasmic	1	56	0.81
Transmembrane Helix	57	77	0.91
Cytoplasmic	78	91	0.76
Transmembrane Helix	92	113	0.90
Non-Cytoplasmic	114	142	0.81