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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39586311, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FRASSSKQFA NQLVIEVPVN TYKNAKKIKG VGSAHRETKH FSSTTTMHGP KRIFYGKGVA  60
   61 RAFWILIVGL ALAMLCFQIF VLLQMYFSKP TLSQVSFIVN EGGMDFPAVT VCNFNPIKKS 120
  121 YVRELNASGD LTGETLEYLL QTNMDAMFVF SNLDRHNLKK THDEAETYFQ NHTDFQIINF 180
  181 LRTAGYDCGE IFDCCKYMKP KVTSLGKCWE LDLQNLAPEW MRKQISPGSE AGLQMIVDAQ 240
  241 LEEELRGENG DAKAIFSDIY ENGFRYYIHP PGANAELSSE GISVSPSRTV YSAIKTVSHN 300
  301 LLSRRNWGNC SEHWPGHYDT FLYYSASACR ALCIAQHFNN TCGCAPFTYN VDGKKKICAP 360
  361 YESITCMDEY MLRKVNGTDY LELPDCTECH MECQSTSYTS YNSYGDGFNR GSLEWLKKIS 420
  421 NKTESHIKSN VAVINIFFLE MFYTSYSQVQ ATSLTEILSD IGGNMGMFLG MSVITITELT 480
  481 LFFSKIFWIM VSKRRRQYMY SKKKNEKEKE QQLDDAVKEF QERRSRRNSR ENISALSNYS 540
  541 NRIMPIEEFQ KKFAYKNGNS EENLSSASLD SVIELKFDIN ELRRQLNQQS SDGIARIRLP 600
  601 NQTTRPNSTN LENYSSTPPI FTIEPSSRRS SQTPSPPSKP PN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle