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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39586310, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSRSYRNEG FENDDKYLVS FSSGSSGDIS PTTSAQCNLR YNGSRSHMVI EVPAAQLKRI  60
   61 KKAGGTVSVE RETQHFCETT TMHGPKRIFK GKRWATLFWF IMVSCALGLL ITQVVILASE 120
  121 YLSSPTVSDV SFLINEDGMD FPLVTICNLN PIRKSYIHEI NKTGDVHPEM INYLMQWFTE 180
  181 IPTLLGSSDR QNLHEGNEDL QMYQKNHPDF SPENFFTDAG FECKDVLKLC SFQGELFDCC 240
  241 SLATPVLTPL GKCYTLDLSK SPKLYMHKQT EPGIQAGLGI TLDAHLEEQF DGVNDSMDAL 300
  301 FTNSFVDGFR YFVHPPKTVP HLASDEFTVS PNSVAYSAIS GDRFVLLPSH QWGNCTEEYP 360
  361 SEIKSELPYT SGNCLALCKA KYFLDSCGCT PALYNIERKL KECTPYETFT CIDTKLSDHN 420
  421 NGKLEFIPPT CKHCAQQCNS LVFRAYNSYG SQFSSGAFNW LRSKNSNWTV GHMKANFQMI 480
  481 NIFYRDMSYT EYNQVQDASI TQLLSDIGGN MGMFLGMSVI TITEICLYFS KVFWIGISKK 540
  541 RRNYMYSKKI NEKTYEKDVC ETVEKMKVIA SHGNLSSLAS MNGGPSIKNV DQAGNVEFRI 600
  601 NLKDLADQLD SDSGCSPTEE GRSRSSIQNI FIGYSYGCLP NLTGGGSSSG RCCPPGPSCP 660
  661 QTNHCSASYV SPPVSGPTSY AVPPSYVQPP QQYAQPPPAA VPPPPSPKYP TPVQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle