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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39586190, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIRIGKLDV FIVIAATICI VFGIVMWAAF SSIYSTLVIQ NLRLSENTDT SLGYSAFQYT  60
   61 NPQVTNVMKF YFFNLTNPDE VKYYSAAPNM VEIGPFSVIE SEQKKYLDFN GDKSQMFYQN 120
  121 YKKYILSKDY SCDECDWDRT LVFPNPPGLG AVGSMIDPQF KITRTGRTII ATALMILGEY 180
  181 PFVSHKVREV LFDGYEDALL SAAHSGFVTI LSGIFKGDGE SIVPIPIPQM PKFGYFQGYN 240
  241 NSRDEEYWIE TGKDDINQIG QVKKWAGITE LPGSWWTGDH ARRISGSDSG SFTQMHLDES 300
  301 STADMFFSFM CRSFTKTFYK KDTIQSIPTM GYHIGYDEWD TTSDKNIGFR YRNIEKRNYF 360
  361 PDWPKCPPKG ECHQAGSIEC WKSENFCHAC CDGSFYNGTY FLPPGMFPLV CYPGRLQPTP 420
  421 FAVVYSPPHF LFSPDEVRNP VVGMKPDPEK HEPMIYYHET YSGTTLKVVN RLQVNMPVIK 480
  481 SHDVPSSQNM PNVMIPLFWQ EATPIYHQFI FNQVWLGFVL VPRLMTVLQF VALGFGLFLL 540
  541 ALLFFLQLRK SKSSSVKPMK SSFLERTSNW LSSTTSNSYN SDQSGGLRRM 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle