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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187027336, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTTLLVLLIG SSSLAAKFDD CEQQPAALTQ VRRVGAKHYS HKLDFFHQKA LPYNAIYITD  60
   61 VFLQINLTDS EKYQFYQGSN CTTVQDLYDN DNRYFGLLKR AALLRSHQLS PFNDTIVGVA 120
  121 TAEPYEISVL IWKVNYIRVG IYVGAIVLFL LAGKLVRNVL FYYTSGCSFG LLASLLLVAF 180
  181 IVWRVAPKKT IGVPILIGGW SVSLYMLHFA WSNLQSILME YQKYVIGYFA TVLLISMAVC 240
  241 YKRGPPTDAR SHDIAQWTLQ LVALALVYFS CQVIEVSTGT IVALVVQQLS RGFLFTGLHW 300
  301 YFKGLGSLWR KIFPKTRRLL NEEEYDEIGQ KTTREQLAQL REYCKQEGSR PWKIAGNVRS 360
  361 ARRRRLARFI EGEDDHITED EIYAHELTGD LLDRDDYENQ DLDEMPEHYE LEEDEQDDEE 420
  421 DWDEVVVKRR ASENGRRSVQ SIRVPRSVSA RLLSPYRNNL NRSLQNTYRR NDRQPDRSNF 480
  481 FSEHRQRAPQ TERIYRSRRV EYDVMNGRVE PPHFSTSSSG STTGSGMTPS EYMRRARKID 540
  541 SASKTPTRRI RNPAEEAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle