YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39586066, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWGVLRSHR ILPRHLMLSS RRFQEEKAPK VKSLPPEERG RYKVATIPNA ICAGRIAATP  60
   61 LIGYLVVQHH FTPAFALFTV AGASDLLDGW IARNVPGQKS LLGSVLDPVA DKLLISTMFI 120
  121 TMTHAGLIPL PLTSIVILRD VCLIAGGFYK RYQVMSPPYS LNRFFNPQVS SMQVVPTMMS 180
  181 KINTVLQLSL VALALASPVF DFSVAANEAI FALGCATAVT TVYSGLQYAS GKAIKKL

Type	Start	End	Confidence
Cytoplasmic	1	50	0.90
Transmembrane Helix	51	83	0.58
Non-Cytoplasmic	84	119	0.63
Transmembrane Helix	120	143	0.65
Cytoplasmic	144	181	0.81
Transmembrane Helix	182	200	0.82
Non-Cytoplasmic	201	208	0.66
Transmembrane Helix	209	229	0.89
Cytoplasmic	230	237	0.87