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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187035325, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNFTVSPLP ADTSWNSPYS VPIQVIVWLI IIVLSLETII GNAMVIVAYR IERNISKQVS  60
   61 NRYIVSLAIS DLIIGIEGFP FFTVYVLNGE RWPLGWVACQ TWLFLDYTLC LVSILTVLLI 120
  121 TADRYLSVCH TAKYLKWQSP TKTQLLIVMS WLLPAIIFGI MIYGWQAMTG QSNSMSGTEC 180
  181 SAPFLSNPYV NMGMYVAYYW TTLVAMLILY KGIHQAAKNL EKKATAKERR HIALILSQRL 240
  241 GTQVGVSLML QSKAEKEKAE EAQKDSGYTS NQAGGSMNTD NDQNLGVIEE ERSGFLSRRE 300
  301 SGESYYPGPH PTAANSRRCS EMEKSSLLSE SEGIPATRPI RSYGRLSLRS RYSGSGSITT 360
  361 THEEEKELEK ADSLQKLFAD DELGSVLNFK DEKLKNTDSN NDSDTTSVIL QRSRKYKKNK 420
  421 RPRSSRRSEH STPGRIAKVK QTEAAAAQLI EEPVQEDDQP ETIEVKRTDR WVVSMKKRIA 480
  481 RALIRRRSTR KERGSSSNSE KISTISTVIT REKVISSIFA PIAVFNRGRK QTKAEKRAHK 540
  541 AFRTITFIVG FFAILWSPYY IMATVYGFCK GECIPSFLYT LSYYMCYLNS SGNPFAYALA 600
  601 NRQFRSAFMR MFRGNFNKVA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle