YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187036614, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYTTDISLF FVILLNLCTV SIAVKQSWEI NQDLVTNENK EHTVFGDMRK FYIYSHSDAL  60
   61 ILVLTPAQLL RYENSKDSDL TIRGVSIKGN SNNRWENNIV PFVISPQYSA TQKKILISSL 120
  121 RYFERVSCFK FVDRTTQNDY LFIVPLDGCY SYVGKIGGRQ ALSLAADCIA DYIIWHEMMH 180
  181 AIGFEHEHQR PDRDSFIRVD YSNVIPGQMI NFDKLQQSQV EFPDSYDYKS IMHYDGYAFG 240
  241 RVDGVRQVRL ATMIPLKPGV RLEDNMKFTA TDIEKLNRLG QCGTRGGQYS NQGVVAATCK 300
  301 DVATAISCEG NRRRGMCKNP FYKQMMIKSC QKTCRLCSYA RSIDEDENLT PNTTRKPLKC 360
  361 EDKHPRCDVY SQNGFCSLPF YDDVRYQLCA KTCNLC

Type	Start	End	Confidence
Signal Peptide	1	23	0.78
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	396	0.99