YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1098478
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKILVTGGA GFIGSAVVRH IIRNTQDSVV NLDKLTYAGN LESLTDIADN PRYAFEQVDI  60
   61 CDRAELDRVF AQHRPDAVMH LAAESHVDRS IGSAGEFIQT NIVGTFNLLE AARAYWQQMP 120
  121 SEQYEAFRFH HISTDEVYGD LSGTDDLFTE TAPYAPSSPY SASKASSDHL VRAWLRTYGL 180
  181 PTIVTNCSNN YGLYHFPEKL IPLMILNALD GKPLPVYGDG MQIRDWLFVE DHARALYQVV 240
  241 TEGVVGETYN IGGHNEKANI EVVKTICALL EELAPEKPAG VARYEDLITF VQDRPGHDVR 300
  301 YAVDAAKIRR DLGWLPLETF ESGLRKTVQW YLDNKTWWQN VLNGSYRLER LGTGK

Type	Start	End	Confidence
Signal Peptide	1	16	0.71
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	355	0.99