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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187034852, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RDNSRNASET SSIQDLLINV EANDLSSVVN EEVSITMSAP PSPETPRKID FESEIENPKS  60
   61 ERVRRRLTLK NSLGSDLEND GEKSTPVRKP SRISYDERLT VICDSQTSSP LHTPSPSQER 120
  121 EKSPFDDVVQ PKGFFGFFWE EMTRGYSLHN DHARFSEKRR KVYAFLRIPL ELEQFLAYGL 180
  181 LQCIDSFFYL FTFLPLRFLM SIFGALFRVK RWTSAETCDF LKVLIIFAAS MLIREIDSSF 240
  241 LYHQVRSQGT IKLYIFYNML EVADRLFSSL GQDMFDALLF TANSERRLSA GHIVRTTLHL 300
  301 IVAIVYATIH SFLVILQATV LNVAFNSHNQ TVLAIMMSNN FVELKGAVFK KFAKANLFQM 360
  361 ACSDVRERFH IYALLFVVMI RNMTAVNWNV DSFAEMVPDI IMVVGCEYFV DWLKHAFITK 420
  421 FNEINSEVYK DFTITIAFDV IRSREESAFS DYSDQVARRM GFIPIPLSIM IIRVLSQTFT 480
  481 LDNWGSIIVF VIGWFLLLAI KCCNGVIMLG KACQHVKRFR DIQARSEFEL FRKRMVEKKS 540
  541 KSAPNSPRMS LIDFTDVLHQ PAAGKGFTVS DMLSQWDELQ PSLLSDNRRS TDRDTAISGL 600
  601 MARNDERTPR RAVSMAHIPR RDRSEPPAAS IDQEPTDTDE PPITIATSAS QVNSEQASPT 660
  661 KKKAPAPVTA PVLTTTSSDE LADVTAYKMP EQGVQRIE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle