YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157766614
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRSPVLPPW VSTWLLVSGV ICLIDVIYTM FRPYTNAPDG FVSNTLFYGW KLYSSVDIRY  60
   61 ADTKDVVTCS TGRVMLIEIV MNFVAVYLAL KRSRHALLVA FTTSAFVFWK TFWYLVMYIA 120
  121 PPAGTPSFFT DNYGYLGITL IFWIPNGVWV VMPFLAMCAL WNRLALPVEY QEQENNNYEK 180
  181 PPGLSSPLSS P

Type	Start	End	Confidence
Cytoplasmic	1	9	0.82
Transmembrane Helix	10	31	0.91
Non-Cytoplasmic	32	69	0.82
Transmembrane Helix	70	90	0.77
Cytoplasmic	91	96	0.86
Transmembrane Helix	97	117	0.88
Non-Cytoplasmic	118	135	0.82
Transmembrane Helix	136	158	0.87
Cytoplasmic	159	191	0.94