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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157773281, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRRLVAIPL LILAVTFQTE AVKIIDNGLA PPEIVHTPVS TKPRCKVFAP PLDLIFILDS  60
   61 SGSLRDKFQD EIDIIRRILK HVTIGKTATR VMLIQFSGTQ HLEFNFEKFT DREELLAALD 120
  121 VLRHVSGITR IGGAFEFALQ QLKTPGSGLR DGTVPKIVYL LSDGRTHDYP KDWQMSDVLR 180
  181 REIPNIDIWA YGTGDYVAMA ALANYTQSEQ KIVTNQNLQK LEPQFEKYHG TEICEQQPTC 240
  241 VKGSDKPLDL ALVVDASESL DHLFSDQKKF LVDRVLGNIN IHPEAVRVAL ITYSGQAFVH 300
  301 FKFNSFLYGN NTSVQGFVKN IRSIKGTTAT NVALMDAFDL LTSKDPSTGI REGVPKMALV 360
  361 LTDGHSHRSP KDMAEKMRAA GIIMIAVSVT PRPLVDEAEL RLIAGSEKRA FTPPNLHEFE 420
  421 SEFMKYVGFG CDGIELPPDA KPQVRGATDV KCTEHSMSIV VRTQRALQGL MYAHMYHDEP 480
  481 ECMMKKTDNN REIQMTFMEG KCGLVKTPSA DGRGYHFNIT VILQFHPLII TRADQGLDMS 540
  541 CFVPSAVPRQ ELDQAILKNA ADTQCNYRLH RYSPGQCVAL DAKVGETLYH RWECDSPPEY 600
  601 NYLVHDCFVQ SEKHTQQILD SNGCEVDQHF LETPNYSRFK DYPDDAYVFQ EMSVFKFPGD 660
  661 GDLIFHCRIS LCNMKDPNAP CNQSIPPKCP KKVPVLPVRQ KRDVSAEQWM SAEWRSKQIR 720
  721 KRQIELKNRS RRQIVETKQG YYMTLQVETR TLNVLLSESI RPRDSVKYCD IS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle