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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187032118, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFFHFILLL LFSISTVPAF LLYGCNLSDN LCDNDESCYP DGVFGQCFSP ESGSPEPTVL  60
   61 DNLDDTQLEL LKLELTRLAS KDRDWGDEET QCVLAYFKMS MFYQLQYDPD FCQVRKPANV 120
  121 WALIQLIDTG LSEDPSLLDE EAAQPENVTD EDMAQIIEQL KEPSLPTEED IEEALNAENE 180
  181 DVDDEILDQY VQAVVNNENP DFSELSDAIL KKDIEQVGEV NQGLDNTEHK IVKGRKDQVV 240
  241 TRVDANRVYL KVHLKNEDQL MPLIEFLQNT IAIPNNLYFD DFQFDNGQLS MRISRFEGAK 300
  301 PKAEKRIDSV EGVASAVYKR RKDIARLSGA DVRETGIGSG EDGSLPVESS ERDWLLMPVL 360
  361 FVCAFTVTAL GLVAAVQIAR SRRHYKDNIQ QIAEQLDGKT SFAYQDLCRQ RADGGRASKS 420
  421 SSTSSWCEET AAPTIDISTG HVVLNFLQEY LSEPTKIEAQ WNGIKDYHNE ERTKTKAEKF 480
  481 AAQNRTILPF DDNIVDIDGK TAENEEFYLN ASFIYDDDPR QAVYIASQTP ASNQVAAFWQ 540
  541 TIWQHGVCLV VNLSTPEECK QEKNYWPDTG SEVHGAFEIH LVSEHIWSDD YLVRSFYLKN 600
  601 LQNSQTRTIT QFHYLSWAKD STPTSAKSIL EFRRKVNKSY RGRSSAVLVH SWDGSGRTGV 660
  661 YCAVDVLCAR LLRGIRQIDV VATVEHLRDQ RDGMVATGDQ FKLVYGCVAQ EVNHLLKSIA 720
  721 AQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle