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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39584833, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLATSAIAIF LIAWSAIFLI DYVLRVAQFE PYLHLCHRYG IEVSPFQLRF YVTSPPKENI  60
   61 LLNEKADILD DEKKSGSDLF FEESRRSKCR NLLVRVWFAC GVLASIICLL GMTAYMSHLL 120
  121 LKDVGQWVTT TRPKTQAYRG MEYRSMHEVL TSISPREVKT TTEQMQNPVI VESAEYDMIE 180
  181 DGQKSSSRGL VPIIPGFNLP WSHIPIFMTV LVVAAVFHEL GHAWAAISNG VTVNGFGIFI 240
  241 LAVYPGAFTD IEPVTLKRAS AFRRLQIFGA GIWHNLLLAL LALTVFHLTP IILSPILTQG 300
  301 NGVSVKAIDA RSGLSNPKTG LVSGNIVKSI DECDVETVAD WWRCIRASKN MHNGRCVDKE 360
  361 AVEAATAFNH RTEADEILCC DEFNVTTAHV CFEREEKVPK GVETQTRAPQ LNALLGLEGH 420
  421 DDTPYGAAGT GQVEDKTITK YSCLHARHVV EQAVCNVSEP CKKEEADREK VCVYPALHNG 480
  481 TRLVKIELGN RAKPILFVGQ LNEMLQMVSI SPWTPRFSFV QISWLEHFEL AVKYMFTLSL 540
  541 ALGLFNAMPV YGLDGQFIVR TLLKSSGFSV K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle