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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39584578, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLTLKKSVF RGEKHLLQKA TPLFVHFLMI VSVGAYAIFG ALVMRSLESK TVTTIEKKTD  60
   61 VHRRHANLTS VELPTITPLP LELRHRRRRR HNETQSPISD RESREKRAAA HVMRSRKCVI 120
  121 GVIKKMSSME CSMDTLDEKL VKALDECYHV AVEHNTHVNH VLYTNSKEEV ESVGEEAEEE 180
  181 VAEWSFMDSL LFAFTVITTI GYGNVAPRTF GGRLFVIGYG LIGIPFTLLA IADLGKFISE 240
  241 MMVVAKTFCK KTWKKLKKAW NPNFIRYPKL SGAKDLSNTD IEEKILENEK VENEIEETSE 300
  301 TSEEEDDLTE TEATSLFILF LVYIAFGGMM LAAYEPDMDF FKAVYFNFVT LTSIGLGDIV 360
  361 PRSETYMLIT IVYIAVGLAL TTIAIEIAAD ALKKLHYFGR KIENVGNVAI WFGGKKITMK 420
  421 ALVKNLGDQF NLPTTVVKSL NLDHFVDQAI KVEEGEIETL RPPPFEPDSE RFDAEFADEP 480
  481 ESEWIRDPTP TPPPTPKPVY RLPSPKPPSP PPPPSPTITD DSMVIATPSP EESDDDQARP 540
  541 LTAAEIAAQK RKAYSEEAWR RYQEYQKQWK KFRQTQKTPA PSSGASTSKQ AASGASPEGG 600
  601 GIGGTGPSTR SQSVTSVASG KTSRSATPES KKSSHPSSSS RRESGAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle