YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25044825
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATDHKIYGF EEVAKHNATK DCWLIISGKV YDVTPFMDEH PGGDEVLLAA TGKDATNDFE  60
   61 DVGHSNSARE MMAKYCIGEI DAATVPAKRA YIAPQQASYN PDKSSDFLIK ILQFLVPILI 120
  121 LGLAFAVRHF TKVD

Type	Start	End	Confidence
Cytoplasmic	1	106	0.75
Transmembrane Helix	107	130	0.78
Non-Cytoplasmic	131	134	0.75