YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39583982, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETSFVFENQT IGMKKEDGET CMSVTFQVEI LNEQNNNSVP IDFHLPSGVI KGKCAADRKS  60
   61 EAVISSTIEE ADGRLKTLKF VFRTEEMRVK RVDELRWILN KVVYVEKFAG SSAVFESDNS 120
  121 SVIFSAPLTQ KYVCEDRINV TLHSENFDFP ILVMFSPEID VQPYGPKSNF YLCERTRKRT 180
  181 LSESLQHRST VFCGVVLAIS SIAHIVGHML RRHFMPHRKE LYENLDRLPA I

Type	Start	End	Confidence
Non-Cytoplasmic	1	188	0.63
Transmembrane Helix	189	210	0.87
Cytoplasmic	211	231	0.59