YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157762134
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQNVTDGIS NALSTSEKVR GWKLVQKTIP RIIEYGRSEG ILQVNVQSNA FNITGIVIAA  60
   61 QEEAHTQKEP KSGDKVNLPT NDITTMHEAI PFLPVPVAIT CLLFNIFIPG SGTIISGFSA 120
  121 LCMGQPRINM KEGRKLITLV VNLLVGISQF FTITFLFVGW FWSIAWGGLL IIHSMQYREA 180
  181 LQQRRQEAVA TAAIEALTKD SILHRRDVKT LVKSHKKSKK

Type	Start	End	Confidence
Non-Cytoplasmic	1	94	0.48
Transmembrane Helix	95	122	0.74
Cytoplasmic	123	135	0.50
Transmembrane Helix	136	156	0.64
Non-Cytoplasmic	157	157	0.27
Transmembrane Helix	158	175	0.76
Cytoplasmic	176	220	0.76