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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157771466
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPRMFKFQPN PKVKNRFQDE ADLRSLRSFK TDFSNYLASD TNFLNVAEIM TSYAYGESNN  60
   61 ANEKEIQCDL LTENGGIEID PTRLSYRERI RWHLQQFCYK TSSHGIPMLG QAPNSLYRAV 120
  121 WVFLLLICAI QFINQAVAVI QKYQKMDKIT DIQLKFDTAP FPAITLCNLN PYKDSVIRSH 180
  181 DSISKILGVF KSVMKKAGDS SAEASDDGVE YDMDGITIQA KRRKRGAGEK GTFEPANSAC 240
  241 ECDEEDGSNE CEEKSTEKPS SDNDMCICAF DRQTNDAWPC HRREQWTNTT CQACDEHYLC 300
  301 SKKAKKGTKR SEIKKEPCIC ESKGLFCIKH EHAALVLNLW EYFGDTEEFS DISTEEREAL 360
  361 GFGNMTDEVA IVTKAKENII FAMSASEEQR ILMSQAKHNL IHKCSFNGKP CDIDKDFELV 420
  421 ADPTFGNCFV FNHDREIFKS SVRAGPQYGL RVMLFVNASD YLPTSEAVGI RLTIHDKDDF 480
  481 PFPDTFGYSA PTGYISSFGM RMKKMSRLPA PYGDCVEDGT TSNYIYKGYA YSTEGCYRTC 540
  541 FQELIIDRCG CSDPRFPSIG GVQPCQVFNK NHRECLEKHT HQIGEIHGSF KCRCQQPCNQ 600
  601 TIYTTSYSEA IWPSQALNIS LGHCEKEAEE CNEEYKENAA MLEVFYEALN FEVLAESEAY 660
  661 GIVKMMADFG GHLGLWSGVS VMTCCEFVCL VLELLYMAVT HHITQERIRR RENAANEF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle