YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157758699
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVVVVNGDS DFDRKFSAAN GKAVFVDFTA SWCGPCKYIA PIFADLANQY KGSVFLKVDV  60
   61 DECRGTAATY GVNAMPTFIA FVNGQKKETL QGADESGLRS MCSKYGSTSS AWSGSGQRLS 120
  121 STAGSSTGAT TGSTAPPQRA AAPAGPTPLE PILQFADVIN QRLNGLGIPN LDAGGFQIQP 180
  181 FHMALGLILL FFFGPFGALI ALAICFFTQQ RGGAPGQPRG AAPGGAGGGG GGANRQQPPP 240
  241 RAVFGGSGQR LGGN

Type	Start	End	Confidence
Non-Cytoplasmic	1	182	0.48
Transmembrane Helix	183	207	0.89
Cytoplasmic	208	254	0.53