YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39583640, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNGFLAFYP CLIIVLVECT KSNQDFDYEL SKKALEFAAG AYSLDPNPCV LKNNASVLFS  60
   61 KKVECDYMRD ECWSVIAADD KTIFVSFSGT KSKEQLVTEL IESIGRPKHK LHNAGSVHYY 120
  121 FYSALKTMWS PMERLLEQLR EVMPNHRIVF TGHSLGGAIA SIASTVFVRN FPDASNRTLS 180
  181 ITFGQPRVGN LEYATTHDGL VGAGSWRLVH GRDIVAHIPF CVESYARSCV PFYNHGSYHH 240
  241 GVEVWFPGNM TNQDTFKICT GTPLNEDDSC SNAHKYFDIN DHLFYFGHHV SDYGVNGCVD 300
  301 PTND

Type	Start	End	Confidence
Signal Peptide	1	19	0.71
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	304	0.89