YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39583577, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPYFLLLLP LLFLIETHAK RLPQIYWNST NPLVERYAAI GDTLDIVCPF FDENSDERTE  60
   61 QSIIYRVTEE EYENCEHRSN AKELGRCTQP YQEEKLKVAF RLMSPNPSGL DYRPGVTYYF 120
  121 ISTSTGSRKG LYNEQGGLCA SHNLKMVIHI TDRNGDIGIQ HHRHHHHKKT TTTTTTTTTV 180
  181 PPKTVPATQE DMDSSAEKLW EQFYEKVMPI DNKWPEVTRG ERVTLYQGDK KDEYEPAVPA 240
  241 DGLDFEIHEI GDVESLYSST SRLQYLLLLP AVLMLRLL

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	278	0.99