YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39583493, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSFVLILCA LVVVSNGIHV NTTGCGTSKV CIFRPRGCDP NLDCTIGVTL SVIGPNQMKV  60
   61 QMVAATIYPP VQQQYVAIAF SHDRAMGNDS VSECVISNMG EFVGYEPEVY VSYNKGKSND 120
  121 RVFLNDDEHA ELFTDLSGEV VDTRLVCEFT QQIMPQIDNK NGLIWNLNSP FHIMAATGSA 180
  181 QPDEVNAHEL NRDSHSFPIT SDEMINPVTF GNDFEHPTGF APKINTNRIE KRVMRPTEAP 240
  241 KSSAFLIPLI PFVLSVFFF

Type	Start	End	Confidence
Signal Peptide	1	17	0.98
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	259	0.98