YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187030203, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTLLLFLLL TCRLADGWFL GMMGGGCQNR CPTYSGYYQN RSPNPYAQQP AQYALPQTPP  60
   61 PNQYATAPAN YGQSPQAYPV APQHAIPMNS YAGGQYAVAP SYPTPPQYPV AYPTPPAYVR 120
  121 PPPPTYVRPP PVYVTIPPTT TTTTTLPPPK CFLNNQGFKC CNRLLDQYLD QVVTNMQRPS 180
  181 WQRCNLQRFA TQLQDEAQGL FNHSMETVVA SGHMENRAQY RGDLYCKKRS MDGKLVVLYG 240
  241 SAVPYALENG VTRPMNEDEL RMANYPAKYD EIGTYDGTEN IWT

Type	Start	End	Confidence
Signal Peptide	1	17	0.95
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	283	0.99