YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157764940
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRRLVFLAL VCFVDSASDV AGPLTDDFQT WLATNGYSSY DFVRADYGQG SYGGKTENAP  60
   61 KVVNTPVVFI HGNSDSALRK SSAATGWSNS IEYFLEHGYT VAELYATSWQ DTSALNAAKR 120
  121 THDCTDLIRL RKFLEAVLAY TGAPKISVVS HSMGVTLARK IIKGGSVNAP DGKCDLGLPL 180
  181 NKKVEVMIGI AGANYGLCNC EGGSATLEKT CNRDNGLWPG DSCGLNYLDC GLFPLVWPCS 240
  241 GVNYSSFLMQ LNSDKNKEGD YVFSMWSLSD DLIEYGNMVW GRSTSFIPTS DGKVIYHVYT 300
  301 HMETKELTYV DQYQMVKYKT IPTTT

Type	Start	End	Confidence
Signal Peptide	1	18	0.96
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	325	0.99