YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157750220
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLLLPLLI YPLLLVGQNL IIDVSQNAIQ KYVSSMSSQF KNEIHNSKLP PMEASRFICG  60
   61 VVLKDTTVSN IKFSNFSVEL AGKFKDYYLN ITDFSITISG NYIRKFFFFK FHDSFSVKLK 120
  121 FKKAALGALV PSFANGLPFL HGVINCDFSP VIIDDPVTDG WFVTSLIYDA VEENIRDIVC 180
  181 LKLVESLDKK IRSDIYELQV DFPLFSNSSE MSYRMFKKAP YMTPSKQIRY FIEGEIELPV 240
  241 SEPAVFIPEE VIDENIQRHV AYHIHEKLLA EMLDAICEKG LFDSNFTSLP SMKSVSYLCL 300
  301 STSVKIQSLS STITIIIHIT SLETYPDKQE KTQLRSFMVT PLHNSEHELF IRLKSQIANR 360
  361 WLDNTFTEQL FNHLSQVLSD NFRLPLPFIR NSSISDVIFL SNADYFTILP NFDFHHNDTQ 420
  421 L

Type	Start	End	Confidence
Signal Peptide	1	17	0.91
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	421	0.99