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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39582646, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LFLIYSTFHL PTVIPCEVTF VIETARNFNS SDIEKVLEKS VDSLSQCTRY CSSIQNCSHF  60
   61 TFSHAAEKNI ISNCHLFRST TYSSNSPHSI ETTSGSLTVG TKTCLEIKCP KRSFSFEKFS 120
  121 EKSLLNSSFI IRTFSVPVEE CLSKCQKDSS CRAALHNHVT SLCQLSRVSL NSVYNPRLYF 180
  181 KSSYSTDLYE NNCIDYTMTS SGCTFMRVKG GGLKSVSDQL IQNVRSTEEC EQMCVVRSRI 240
  241 ADPCRSYTYD NSTMECHLMW SSVRMLGRSP LEVLKPNLFH GDLDDCVNFS LKCRENNLEI 300
  301 KASSMRMFIG KMMTKKSKKI MCEEAYQGEY DFSSKFDFKK CGLDEKKTKD STYRGMVHVK 360
  361 EGSTSLVTIR DKMLQVNCHL HKSMPSEDKF LSVQMNVREN NKTNQVMSDA IIPTSTSSSP 420
  421 NTPKFSLKVL GLDSNEADTV HIGDFGWIVL NVRNSAEDFT TEVVYHAMVE TCTVGCMPKC 480
  481 NLDMMLPEEE TNVHSGPLSL DLPRHRMVRR SLAGEPRELE LTSDVYKVTG HKLTLLNPPL 540
  541 PEKAFDFKPP SKLQEEKEMQ ESLQEEFQDG DVIVVKHSTS LMSSVKTCLV DDVTCMLTVI 600
  601 LGAIQMFLMF SCVLIMYCYY RQWRFYRELN RPPEHNVQYY 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle