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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157748159
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFMRVGQLKS RMPHPLSLLL LLPLICHGQI PTDYGSMRSN PLPTAYIPVG VGFTPDLTNL  60
   61 KDGFGTFGAY IGNQNYNAET YVTCGKKQTN YLNPQMVDSA GAGVHVVCEP SPDRVIVTLD 120
  121 GSPAIYKQWK RDLKQECEMF TCSSEDYPAA GTQIGVMDVK AYYEYNGSPT PSKPPMLVDE 180
  181 KDVKVMSADP EKPETNVCKN KKAGYSSDQA TGSVLFANEG KCYKTYEDLS AKIEESGTFI 240
  241 QVPRWLKPGE KVRNKRSSFY HGEHAPSSGT RTPYNFQSIT SMDGMNYKDC LTACDVGSVV 300
  301 KYSMHPYAYQ MTIRMDTRKC TAFRICIAPE SHSDDSVVPK CDPQKIIDVN VQSGIVTWPN 360
  361 TGRSSLIELD HPHRDKAYPL AIEFGYGIDI NGKQQAEYYI GNDHREIVSS DSLGFSAEDS 420
  421 TKLAFFFPTE DCLAPRAGIF SKNIQHGRTL TRSQSVTMGA PYNQTSKIPI TAPQAEVVTT 480
  481 TTTIAPVNLP LTTTQAAPRA IPDALVGGKD VFETNAFSKA LYVEGKWWTW GIYIGFVIGT 540
  541 LLTLGIGAGL FYALRRTVFA IWYRGMYKRY GCDASGTTGG ITGVGFGNTV TGDVTVQGTT 600
  601 GGTTAGESVM GTTGTTGGTT GTSTETSTLL DKTGGGEQKS LAM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle