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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|780770, gi|21...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNSNMKKKF LFFLGSTSFL SIAGATLIAC QKQDDGAIKK DLESKIDVLT FFPKSVDETA  60
   61 QWTVSRLLSE YRTAKSSDSN LTFDAFVKSK LGSKLGSDYE LTFKEKGADK IEYTIYKKSN 120
  121 KAVSSTKVLE DTKIGQSDAQ KVNAWLDRVK SLVANSSDLK GKKPSEVIEI ETSDVKFKET 180
  181 RDGQDVEFDV PTNWGTVITK SSANDAANDA EGTLKVSVQF SSGDFRRSKD LNLTGLKTSN 240
  241 NEQGGNNSGS NGSKPMTPPT TGSGSGSTDT KPQTPPTTGS GSGSTDTKPQ TPPTTGSGSG 300
  301 STDTKPQTPP TTGSGSGSTD TKPQTPPTTG SGSGSTDTKP QTPPTTGSGS GSTDTKPQTP 360
  361 PTTGSGSGST DTKPQTPPTT GSGSGSTDTK PQTPPTTGSG SGSTDTKPQT PPTTGSGSGS 420
  421 TDTKPQTPPT TGSGSGSTDT KPQTPPTTGS GSGSTDTKPQ TPPTTGSGSG STDTKPQTPP 480
  481 TTGSGSGSTD TKPQTPPTTG SGSGSTDTKP QTPPTTGSGS GSTDTKPQTP PTTGSGSGST 540
  541 DTKPQTPPTT GSGSGSTDTK PQTPPTTGSG SGSTDTKPQT PPTTGSGSGS TDTKPQTPPT 600
  601 TGSGSGSTDT KPQTPPTTGS GSGSTDTKPQ TPPTTGSGSG STDTKPQTPP TTGSGSGSTD 660
  661 TKPQTPPTTG SGSGSTDTKP QTPPTTGSGS GSTDTKPQTP PTTGSGSGST DTKPQTPPTT 720
  721 GSGSGSTDTK PQTPPTTGSG SGSTDTKPQT PPTTGSGSGS TDTKPQTPPT TGSGSGSTDT 780
  781 KAQTPPTTGS GSGSTDTKAQ TPPTTGSGSG SIN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle