YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187028935, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.81
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRSLLGVAC LLATVFCQQE NDLIKDLPGL LFKANFKSYS GYVDANANGT WKMHYMLTES  60
   61 RSNPDTDPLL VWFNGGPGCS SLGGLFEELG PFYVNFDGET LYENPYAWNA KANVLYLESP 120
  121 IGVGYSYDTT TPGYFQANDN QTAGQNYLAL TNFFKVAQPK YANRTFYLSG ESYAGIYIPM 180
  181 LTDLIVQGIN NATNPFPNKN FQGSAIGNGF MNVKGLLNAL ALWSAYHGRV SVQDWDNIKN 240
  241 NCTNNTDMDN FEFSKFTTSK NKIDYVGDDS YCGKLIQPLI SQNADNTEGF DQYNFYQECY 300
  301 DKSVFQAPPP SASGKRVKRS ALAGVSAIHK QYQQLGSFKG TSNLAQNTAT LVNRFSNDNQ 360
  361 FGYFCWNEDA VGKYLNSDKV QNALNIPQAW KDQKNGWEDC RMSIYNNYTL TYETTNQFFK 420
  421 SIITNLKTNF RFLIYNGDVD TVCNYLGDAK HIAQVAAENG LNTLSSRTPW YYSDNQQLAG 480
  481 FVQSYSGKNA NGATIIIDVL TVKGAGHMVP YDRAGPSVQM ISNFVWAANN AFVNYTSQAN 540
  541 FNPNIQLSEM VGGSSTTISF LFAVSAVLLQ LIL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle