YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|515655
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTLSGTLRS HLYFLKPSAC SCNDTSATCE VSITCMLTPR LSQSKVACGS RSLKVSTSLF  60
   61 KTAPVLNSAS NIFSSDSNCS CSLIQLILRR RCELLFNRAC MFAIVQALSI FHYRIVAHQQ 120
  121 AGHHVELAAV LRQVGPAAHP MQTFRHSVAY ERLILCPLIE ASAFDFFVSS VACFNKFFEN 180
  181 IVGCIIK

Type	Start	End	Confidence
Cytoplasmic	1	93	0.75
Transmembrane Helix	94	115	0.69
Non-Cytoplasmic	116	187	0.82