YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187035742, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILHYLVLLA TISSVASIKC HSCLTFCKTL NGKVDPINCD CKSPPNEQCT ANACFAKVEL  60
   61 FADEATAIVQ KGCISDFPAG QRGCQYASNK DTIHCFCDQD QCNTRHKLGS YIPEHLPLVK 120
  121 CCDYTSRHGE DSDSECSKPC TGNYCVVDFD GKEQKKHVIE RKNENLHYCY ALMHKAYKPF 180
  181 GQEVFKKSST CEGHYCFISL TTSEIVLESA DFKHNYEDHD EFVGAARPRF ELQAGCVKVN 240
  241 GEDKVQTGCT VETQGNNSEI LAKHCICDSH LCNFHHLVRG TEDPRPKAVV PGLKQTTSQL 300
  301 NPVRLYTTNK EIDENDILSV MNGVGNFWKL GAFLLTLLIC V

Type	Start	End	Confidence
Signal Peptide	1	22	0.92
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	341	0.99