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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157758305
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.60
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIRCLLCAI ILFYSSQNVE GNSQIDNTFK AKAFVAFPSP TSSIFDWVPF KPFGSKQSTP  60
   61 LIRLKVRAYN RVVFTKKDSL LKEVENVSEY KKEQEKQFEK KKNDPTSIEE KEIIVNEPDK 120
  121 MYEKGEEPKI FLVPKQGETV SRIGNEYGQE EVIGNDNEDE VEKPKDDDFQ IMYDDQLKEY 180
  181 VLKRPLKMDK NGIIDSWNGG DSKERGEEKT TRTGEEGEDD EARRILENEE EGLGVRGIGN 240
  241 ETIRNTPKKE NVTEVNLEEE ELNLEDLEPK SHRFKPGKSK IRTYDLAWMD PRLLEKEEFS 300
  301 VRLTPQERSD WRDKLINLTL LEERRADEHR DYGSSYILPV LKSVDYDNTS VPLAFNDIPV 360
  361 NVAVAFNFLY LANFDSEMME FSMDVEMEFS WIDIRLVNNY TKPIRIREKA IIEQIWRPDP 420
  421 YIVNSKHSYF HYVSFPNIRM RITPEGLVTY TVRVSSICSC FMSFCLYPHD RQECDLRIAS 480
  481 IAYSNQYVKF HWHSNPIRFQ SKITLPELHI TKIKTGECSL RNKLVDASCL KILFSLERDS 540
  541 ARFVIEKYVP STLAMMFAWV APYVPYNYED VRIITPITVL LTLVQMEKGD KEIRTSYLTS 600
  601 IDVWFAAMKS FTVLSLLESL VVLALIKRSR AMTKNAERAA NEFERCTFEA EAYRLNRLYH 660
  661 RVDSICRFSS PVHFEETVEE QQNNYGIKKE RSQIITNEKV LNLPKNHTET 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle