YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157760817
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSMGHQGNFD FLKKNLFLGP LPKLLVFLIS CCHVALAARV CIGQNISATD MSDVPYLFEM  60
   61 AKEPRCTHVI GDIFIMNLTD IELPVDIYRS VRKIYGSIIV INNTNIHTPI HFPSLRFINA 120
  121 TVLPAITAFK NRNVMVSVGP HFKKAISEQK HGITFAVVHN LNFVIDTDQY NLWWLAGYPN 180
  181 GRFLLDSGLM ASVCDENLFK PIAAILGWLF VALALGLSTV AFYDRPTKKQ KQE

Type	Start	End	Confidence
Cytoplasmic	1	20	0.60
Transmembrane Helix	21	42	0.64
Non-Cytoplasmic	43	201	0.68
Transmembrane Helix	202	223	0.89
Cytoplasmic	224	233	0.80