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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187025429, gi...
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPRSVIRCF IGFSFIIIFD FTVILANKLP LNSDDIKPQK YNNRWEFENG AEKIERREEG  60
   61 QPVPTVTIPK EGPFHWKWTW NSKVNTTSTS EATTGTTTTT KATTTTSSPT TSKPRVYALR 120
  121 PAARKSLRNA LRGTTPEKRK KQLAQMGKKM KINKISKSQS NKLHKTYRKV KISENPPALD 180
  181 MFEVNEQAGL NAYLFQGDIN LDDKQIAEFT ASAKSSSRRK RQIQNSALFW PDKIVYYYFD 240
  241 PGLGTNMQQI VTEAMEYLQQ NTCVKFVMND TATNRVKIIN GVGCYSNVGM LGGEQTLSLG 300
  301 SGCELVGTAA HELSHTLGVF HTQMRSDRDD YVTIDLTDVS VSSEPNFYKM TAEESTNLVD 360
  361 YEYGSFMHYS GRAFSTGVDS IVPKDPLMVY TMGGRVVSFL DIKMLNEHYT CSCPSSLNCA 420
  421 NGGYTNPSNC TVCICPWGFG GTLCDERADT GCGSELTATD TWQQSNYSFG DPTNSQTARP 480
  481 RFMYCTHWIK APVGKQIQFR IDAAQYHQCQ YACPFGGLEP KLKSDVTVTQ ARYCCNEFFG 540
  541 EVMTAETNPL PVFAFSRYYI SVWSWSYRYV DAIPTSCVDL SDAVTCLALK SSYDQGCSLY 600
  601 DTAQLKVMCA VTMDLCGKAV SGSGTCQDRF PKSQCSTYSS NGLCTSQLPL IAEFSCASTC 660
  661 GFCVNPV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle