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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187038209, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRKLSSLVAV KFPVDTVKKL RRTEGVGSVF QETQHFSTIT TVNGPKRIFY GKRSARVFWI  60
   61 LVVFAIFIFL IYQIVIVLIY FLSKPTLSQI SFIANEGGME FPAITICNLN PVKSSFIKKL 120
  121 NSTGDLNEDV LNYLLATKTN SMYMYNNVNI GSLEQGHNLS MEYLRNHPDL QIVDFLNSAQ 180
  181 FDCDELFETC YFGGKRFNCC QYMTQSTTSL GKCWELNLQN GSEIWMQKSQ RISPKAGLQI 240
  241 VANARHAEQF TSFHYSSFQE NGFRYFIHPP QVSPDLESEG ITVSPSRIVN SAIKAILHDL 300
  301 LNRDNWGNCT SKWPDDYNTD LPYSSSVCQA LCVANHFEKL CECIPYSYNI NNKPDVCFPY 360
  361 EEVSCMKDKM TKIDENGTTS LDLPFCSECH LACQKTSYES YTSYGLGFNN SSMKWLKNLT 420
  421 GYKERYIREN IVVINILFME LFYTSYTQVK NTSIWSTFNK IFNLNSLWFG MSVVSMIELI 480
  481 LYLTKISWIA VSRKRRHHLF EKKMSVKRIE DILKEAVQEN EEIKSRRNSA ANLKDFDDEE 540
  541 DYDLWYRNPH PYSNTSLDSV IQMAIDFEKF RRPSSKSLAN IVEEEED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle