YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157760639
Protein type:	Transmembrane
Type Confidence:	0.57
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIGGLKSSR GCPTTRRRRP AQDQRGPHPL KYHPYRRDTS AEASNCVTQQ PTSSNFIQRV  60
   61 FQTSCALILR TFGILFARYL TFLLPSSSVM SLNGFGEHAR SASHAGSWYN GNQRDLDRQL 120
  121 TKWLDNAGDR FGTARALISP HAGYSYCGET AAYAFKQVVS SAVERVFILG PSHIVALNGC 180
  181 AITTCSKYRT PLGDLSVDHK INEELRATRH FDLMDRRDEE SEHSIEMQLP FIAKVMGNRR 240
  241 YTIIPVLVGS LPGSRQQTYG NIFAHYMEDP RNLFVISSDF CHWGDRFSFS PYDRNSNLPI 300
  301 YEQITNLDKQ GMSAIETLNP TVFNDYLKKT QNTICGRNPI LIMLQAAEGF RLSNNHTHEF 360
  361 RFLHYTQSNK VRSPSDSSVS YASGCLFVHP K

Type	Start	End	Confidence
Cytoplasmic	1	65	0.53
Transmembrane Helix	66	82	0.50
Non-Cytoplasmic	83	391	0.97