YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157747963
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPKTCTIFA LAGCTNSGKS TLAKEFQRHF GAAETTIINQ DEFYKTEDEV DKIYHPAAVT  60
   61 LTERGYYWSF DEKEAINIDQ FKERILQESK LFKNVIIDGN MITEMDEIVE LCDQIVVLTL 120
  121 DFKTCRRRRE ARTDYVPPDT PGYFENVAFP AYLRHLENAR KRSRTDPKIT FIDVSEPRFE 180
  181 NKSESIQDFR RQILNNHIKL MDLKIEVGLV DQLVNHPSCG AISTFNGVTR DNHAGKEVVH 240
  241 LSYDCHDLMA YKKLRGICEE VRKELPDIKK IAIFHRLGKV DVGESSVVIS TSSPHRKTSI 300
  301 QATGRLIDLL KDKAPIFKYE EYSNGETEGV WKSNVEDCKN

Type	Start	End	Confidence
Signal Peptide	1	23	0.91
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	340	0.99