YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187037605, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQVITDVVN TVTDFFPIKR FAALFPTVAS SPTIEALLPQ PGVDMSPFIR LAGLSGAVAI  60
   61 SLGAYGSHVL RDDPSIEERR RTAFDTASRY HLIHSLALLS SPSARFPLAT AGLFSVGILL 120
  121 FCGPCYHYSI TGVESTRKYT PLGGVTLIVA WLSFIL

Type	Start	End	Confidence
Cytoplasmic	1	46	0.55
Transmembrane Helix	47	69	0.81
Non-Cytoplasmic	70	105	0.46
Transmembrane Helix	106	130	0.83
Cytoplasmic	131	137	0.56
Transmembrane Helix	138	155	0.82
Non-Cytoplasmic	156	156	0.60