YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187032401, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIASYEITC FHIFLGILMF GIYLIVHQFY QQFKLRRERK EPNVFDQFEK IPGLHTIENN  60
   61 SHTFYCGAQD YTMSSSRKLA RIYKQDRLRV ERLLNKLLLG SYIRVPDNTV AVCIPTWCSK 120
  121 IGAKYHEFKC TPPAPYCPCP TILSEFNYTY KMVSGRVQAT FYHNRRCTCL AGICIYMRIP 180
  181 NEPWFFGELP EDLIIDLIEY AIKSYSPRRG RRYRHTPPLV PAFRPNAPPI EISSSEEYTD 240
  241 VDEAEDSENE RPPCYASVFG ARIDATSRID EVAPPNYFSL FSNSSAL

Type	Start	End	Confidence
Cytoplasmic	1	7	0.82
Transmembrane Helix	8	30	0.89
Non-Cytoplasmic	31	287	0.84