YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187032392, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FLIFIISVSD GFKIISFPEI HQKPPEDMNS FGNASVDIDM LEREMVAGEA ANLSGNIAGM  60
   61 SAPKSSSARR GPMQEVDLDT EFDTLEEPVW DTVKRDVITV GAKFSHVILP HGDKQQLLRD 120
  121 WDLWGPLFIC VGLALLLQHN GGTESAPQFT QVFTITFFGS VIVTANIKLL GGNISFFQSL 180
  181 CVIGYCLLPP FVSAVLCSIF LHGIAFPLRL LITSVGFVWS TYASMGFLAG CQPDKKRLLV 240
  241 IYPVFLFYFV VSWMIISHS

Type	Start	End	Confidence
Cytoplasmic	1	120	0.98
Transmembrane Helix	121	141	0.88
Non-Cytoplasmic	142	148	0.86
Transmembrane Helix	149	170	0.90
Cytoplasmic	171	180	0.78
Transmembrane Helix	181	202	0.93
Non-Cytoplasmic	203	209	0.68
Transmembrane Helix	210	231	0.91
Cytoplasmic	232	237	0.95
Transmembrane Helix	238	257	0.95
Non-Cytoplasmic	258	259	0.90