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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157775041
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLQDVANGSA NIVTKILGSF QGSSSMNLTQ FFSSFDMPSC FRKCMPAMDN VGIMLEIAKK  60
   61 PEAMKAMCQN LTESSKCAMA TGCDATFVGA LSNAFQFVCL DNLEKVTAQI TCVQENAGDL 120
  121 QQECENECAV QADAIDKASK NTADQLFSVE TLCSSTSCIA NCYQNNIHKF CEIGEDNVLD 180
  181 TIFSQFESLE RPGLIGYVKE NERNKTGIAK LFGMMMPENC NDEKLKIKIP KKVMLPEKPK 240
  241 SVGSPPDLRK EIPIQKKSVI ETERKVESDD ALLAKAGNLS SAALMYNGKI QTLQCQFLDS 300
  301 RGSPQQTPDF ETLSKILSNH FNKNTTPNTT KASTDKHNVD AKERKCRELS SDQPQTRNTV 360
  361 STTAISNIFW IVLIYFISGI YNKSGRESIK KATVETYDNQ QMPDELAAFH AFHLDSQVDS 420
  421 IENEQEAEQN GTGHTKEEFN QLETPRLADQ QSPHEHEDKD SDTDDEEIRV KRNKKQRVMF 480
  481 TKLVKSRLAS EWEDIGSQTD HSDMSEGHYS DETSEEKNKR EFRNKAKSEK RILRMAAINE 540
  541 KHNI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle