YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157773681
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDSMDMANS SQNTFRRRTM ATSEMREFLS TKDAEPNNFG MQTIPESPTP STPTRRMSIG  60
   61 DSTRIYDWEE PRFNIQGFVV DYFTYRIAQN GLDWYDAPAL PDGVQKEHEM MRSLGTIFEK 120
  121 RHMEMFENFS EQLLAVPKIS FSLYQEVVQT VGNSSNTPCP MSYGRLIGLI SFGGMVAAKM 180
  181 MESAELQGQV RNLLMYTSLF IKTRIRQSWK EHNRSWADFM KLGQQMKEDY EKEKDAEEGK 240
  241 RLKSWSIIGA SVIAVIVCGR IIFSFK

Type	Start	End	Confidence
Cytoplasmic	1	243	0.66
Transmembrane Helix	244	263	0.90
Non-Cytoplasmic	264	266	0.63