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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39580076, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAEADLLEG YDEELGGNES QKRDCRGITT AILVVMVILG MIFAALFAFT PLFNSAHIGS  60
   61 KRLNITDLRA LRYPYAEFAF SEDNVIMQSW EGVEIVENGV SRLIFGRENG AEISPSADLK 120
  121 YFALMDHAAN PGMNPQNETF HLKIVNNNER LLHPMIPSDI EDFFRDLSDS RITHDIGLRN 180
  181 EESVIQAFKW NGKQNDFVFV ESNKIYYKSS PEDEGTIRVS NGGENTVDGL FDWIYEEELF 240
  241 GKKDALWWSP SGNRLAFAAF DNHLTKNVSL KSYHRLHSYT IDTNLHYPKT FAKVLPTYSL 300
  301 SIWDKKSEQS KQMDVQLKDS VSYHYLLAVK WIESNGVEKV VSVWANRYQN EVALTICDWE 360
  361 SAICHLEFEY KYAAKRWVTH DDFNTLIFFE DTLYFLLPRD MKDNAFQQIA SLRISNGQPK 420
  421 TPKFLQLGEY DVSWIDGINK ATRTLYFHAT APKPSQRNLF SFDLSSPKPT LDCLTCKIDN 480
  481 CTWVQAIIDD EMKKAVVSCK GPAAPHTVVL NLTQGSKEYS ELLEDRSYQN RFEEASLPVI 540
  541 ITETIKISDT YDAQIKLSIP KDIYTREKTR AIPLLVHVYG GPNDQNTKDA SQIGIEEIVA 600
  601 SGQQVAILRI DGRGSGGRGW KYRSAVYGQL GTVEVDDQLN VIKTVLRVYK HLLDSNRVAV 660
  661 FGWSYGGFMT LSMVNEAAEN MFKCAISVAP VTNFAYYDAT YTERYMGDAP LEAYSDVTKK 720
  721 LDNFKTTRLL LMHGLLDDNV HFQNSAILIE ELQNRGIDFD LMVYPNQAHS LSSRTAHVVG 780
  781 KMSQFLKQCF SMDK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle