YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39579955, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFLGVRTVQ LASLAGFSWG GSKLDEVQAA AKPRTCPIQI QRPEQVKDDV LLSRKVINHL  60
   61 DKSNLKLRLY QYETCPFCCK VRAFLDYYGF SYELVEVNPV TRSQIKFSTQ YKKVPIIRSD 120
  121 DTTLTESSLI ISQLATFLQR PDQSLDQVIQ MYPGVDSTNE KGKPVVNYPN KFFIMKGKME 180
  181 GEANMAAARE EREWREWVDN WFIHLISPNV YRNWNESLET FRWFEQVGDW HRAFPAWERV 240
  241 LAVYVGAAAM FLLSKTLKKK HNIADEREEL RKACRDWMAA IGPNRKFLGG DQPNLADLSL 300
  301 YGAMNSFYGC SAFKEVILEE KIADWWRRMD SVVKNHEGRK TLEARNPQKQ

Type	Start	End	Confidence
Signal Peptide	1	20	0.90
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	350	0.95