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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3452126
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKGFYISKA VGVVGVILGA GALATIIALS VVYSQEKAKN NNNEVSTTVG PTVGPTFGPT  60
   61 TSKPAVTTPA PSNEAWDKYR LPKSLVPEHY NVKLWPRLTA DPTTGLYIFT GESTVEFKCT 120
  121 EDTDLILIHS NKLNYTELDN GQWARLSAVN SGVKAPAIKT SRLQPVTQYL VLQLDGKLLK 180
  181 DQWYHLFTDF TGELADDLGG FYRSVYMENG LRKVVATTQM QPTDARKAFP CFDEPAMKAT 240
  241 FNITLIHDPE TVALSNGAQR ESKPVTIDGK NLKQTDFEQT EKMSTYLLAF IVSEFTSINN 300
  301 TVDNVLIRIF ARKPAIDAGQ GAYALSKTGP ILKFFEGYYN SSYPLPKSDQ IALPDFNAGA 360
  361 MENWGLITYR ETALLYDEAV SSNSNKERIA TIIAHELAHM WFGNLVTLRW WNDLWLNEGF 420
  421 ASYVEYLGAD VAEPDWNIKD LIVLNDVHRV FAVDALASSH PLSAKEDDIQ RPEQISELFD 480
  481 AISYSKGASV LRMLSDFLTE DIFVMGLRTY LKEFAFGNAV YTDLWNHLQM AVNATGTKLP 540
  541 GSVQDIMNTW VLQMGFPVVT INTTSGEVSQ KHFLLDPDSE VTAPSPFNYK WIVPIKWTKT 600
  601 ATAQPPYWLE QKSATNNEMK TTGVDWVLAN LDVVGYYRVN YDDSNWDKLL NALSTNHQLI 660
  661 QVINRAQLVD DAFNLARAKI IPTVRALSTT KYLNNERDYM PWQSALGNLN FFYLMFDRSE 720
  721 VYGPMQDYLR KQVVPLFDYY KTLTVDWTKV PTGHMDQYNQ VNAISQACKT GHEECLTLVK 780
  781 GWFKKWMDTK INPIHPNLRT TVYCNAIAAG GAKEWDFAWS EFQNATLASE AEKLRSALAC 840
  841 TTQPWLLQRY LEYTLDPDKI RKQDATSTIV YIANNVVGQS LAWDFVRDRW SYIFNQYGGG 900
  901 SFSFSNLING VTKRFATEFE LKQLQQFKAD NSEVGFGSGS LAVDQSIERT IGNMKWIAEN 960
  961 KQNVLNWFLA ETKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle