YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2982311
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAETACVKRL QKEFRALCKE PVPNVVARPS PSDILEWHYV LEGSEGTPFA GGVYHGKVKF  60
   61 PPEYPYKPPG ISMITPNGRF ATHKRICMSM SDYHPETWNP MWSVSSILTG LLSFMMDNSP 120
  121 TTGSVSTTVA DKQRLAKASL AFNCKSSIFR KMFPEYAEKY SEQQKAENMN SELTSNKGDA 180
  181 KPSTTVAQEQ SQAIRHNDKE TGHKGPKRGR SKNFPTWLLV LLMAVFGSVM ALPLLNLDLT 240
  241 NL

Type	Start	End	Confidence
Cytoplasmic	1	213	0.94
Transmembrane Helix	214	235	0.93
Non-Cytoplasmic	236	242	0.84