YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39579537, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRFIDGYEK FERKRDMEYS LLLTLTIEII VTITGYYTNK TEQSMEVVTE LFHLFWILNL  60
   61 IVAAFFIIVS DPIVFATYRA GFRILHLSTL VYIFQSYGQM ITSVFVVGFC LLEFLYLVNG 120
  121 LSREQMTYPG KWITVATKKW NNDASEDVET ARAVQFEKDI SENSEEDVAI QNSKIQNSED 180
  181 SEDEDYKTDG HQTDAESIFD YFSASEGDLR IL

Type	Start	End	Confidence
Cytoplasmic	1	18	0.95
Transmembrane Helix	19	38	0.91
Non-Cytoplasmic	39	53	0.85
Transmembrane Helix	54	75	0.90
Cytoplasmic	76	95	0.66
Transmembrane Helix	96	117	0.86
Non-Cytoplasmic	118	212	0.79