YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|467185, gi\|21...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINDHGSGGV SPTLQPRYSF YAIAGPRYSV VSVGELNNGS PGATSSHSEH RPTHMRHIPH  60
   61 TGLDQPVGTV HILATLSSIT RLTTLIAVLN EVRTTATPAN PATSRPVAAS SRRRRPPTTT 120
  121 YRGDPGMWSW VLHRISGATI FFFLFVHVLD AAMLRVNPQT YNAVLSTYKA PIVGFMEYGL 180
  181 VAAVGFHGLN GIRVILIDFW SEGPRHQRLM LWIISVIFLL LLVPAGVVIG IHMWEHFRMW 240
  241 EHFR

Type	Start	End	Confidence
Cytoplasmic	1	129	0.94
Transmembrane Helix	130	151	0.89
Non-Cytoplasmic	152	173	0.82
Transmembrane Helix	174	197	0.80
Cytoplasmic	198	208	0.90
Transmembrane Helix	209	233	0.91
Non-Cytoplasmic	234	244	0.92