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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18699011
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERFKQWIAT KPFTAQRCKQ FIYTRPRWLF ECIFPQNQGF PFIRYHCRWP CLSPVALTVL  60
   61 IVMADYLIIS LALIGALITW GAGKHSGGTA EIRFIDALFF TAGASTQAGL NTVDINLLTT 120
  121 FQQAIFYLWP MMANPITVNS LVVQLRLYWF EKKFQHITQN ARLVRVPLAK SFTKSRTKAK 180
  181 QQDGDVEKGV NGRKITVMLN GKKSRINNDG TLLGDAKNKG RHGLGLTAAN RTATDGGLDG 240
  241 PLDKADRHTG PAVTSSMTEP RRPALKFADT VTKSDGLGED FLKLPRIRSD EEHIAIVERQ 300
  301 KKGDDEVLRI PNPRDVERGL GPKRVEAGDN EDELLSPHAE AFNLDGEPRA QAADGRHPAI 360
  361 TIEEPDRRKL QETDSDEFMD DVRAAAHTFG FLKPHFPRHK KKQDDVEKEP VIPGPSQNRR 420
  421 RQSMQTLRTA FSNNKAEGTP YLSWEPTVGR NSLFPELTEE QREELGGIEY RSLKTLARVL 480
  481 TVYFWGYTAL GVVGLLPWIL QATQYGQVVE AAGQNKVWWA FFTSQSAFMD LGFTLTPDSM 540
  541 NSFSTATWPL LWMSFLIVIG NTGFPIMLRF MIWVLSLIVP KNSGMYEELR FLLDHPRRCF 600
  601 TLLFPSKATW WLLGFLVLLN GLDVMFFIVL DGPVASMSDG QKVLNGIFEA ASTRTAGFSC 660
  661 VNLSLLHPAV QVSYXIMMYI SVFPIAISVR RTNVYEENAL GIYSHGEEEE HSKANHNDWS 720
  721 HVGTHARRQL SFDLPFIALG LFILAISEGP RIMNPEDAAN GFTMFSMLFE SISAYGTVGM 780
  781 SLGYSTINAS LSAEFSDVGK LVIICLMIRG RHRGLPYGLD RAILLPSDAL NAKDAMAADT 840
  841 EGRLARQISR MSVATHRSDT THNQRGLGHV LAAILHPGPP VPPEPPMEAI HRRSTDPGSD 900
  901 AEPQPMRVTS RRTEPGVVRR SVSHLFSPRP RTAGGHEDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle